NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 1syx_A against 1qgv_A
Query= 1syx_A mol:protein length:142 Spliceosomal U5 snRNP-specific 15 kDa protein
>1qgv_A mol:protein length:142 SPLICEOSOMAL PROTEIN U5-15KD
Length = 142
Score = 298 bits (764), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY
Sbjct: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
Query: 121 RGARKGRGLVVSPKDYSTKYRY 142
RGARKGRGLVVSPKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142
Alignment: 1syx_B against 1l2z_A
Query= 1syx_B mol:protein length:86 CD2 antigen cytoplasmic tail-binding protein
>1l2z_A mol:protein length:62 CD2 ANTIGEN (CYTOPLASMIC TAIL)-BINDING
PROTEI
Length = 62
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/62 (100%), Positives = 62/62 (100%)
Query: 25 DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDL 84
DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDL
Sbjct: 1 DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDL 60
Query: 85 YT 86
YT
Sbjct: 61 YT 62