NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 1xu1_ABD against 1u5y_ABD
Query= 1xu1_A mol:protein length:138 Tumor necrosis factor ligand superfamily memb
>1u5z_A mol:protein length:140 Tumor necrosis factor ligand superfamily
memb
Length = 140
Score = 287 bits (735), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 60
KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH
Sbjct: 3 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 62
Query: 61 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 120
DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA
Sbjct: 63 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 122
Query: 121 NAKLSLSPHGTFLGFVKL 138
NAKLSLSPHGTFLGFVKL
Sbjct: 123 NAKLSLSPHGTFLGFVKL 140
Query= 1xu1_B mol:protein length:138 Tumor necrosis factor ligand superfamily memb
>1u5y_B mol:protein length:140 Tumor necrosis factor ligand superfamily
memb
Length = 140
Score = 287 bits (735), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 60
KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH
Sbjct: 3 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 62
Query: 61 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 120
DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA
Sbjct: 63 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 122
Query: 121 NAKLSLSPHGTFLGFVKL 138
NAKLSLSPHGTFLGFVKL
Sbjct: 123 NAKLSLSPHGTFLGFVKL 140
Query= 1xu1_D mol:protein length:138 Tumor necrosis factor ligand superfamily memb
>1u5y_D mol:protein length:140 Tumor necrosis factor ligand superfamily
memb
Length = 140
Score = 287 bits (735), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 60
KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH
Sbjct: 3 KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFH 62
Query: 61 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 120
DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA
Sbjct: 63 DVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRA 122
Query: 121 NAKLSLSPHGTFLGFVKL 138
NAKLSLSPHGTFLGFVKL
Sbjct: 123 NAKLSLSPHGTFLGFVKL 140
Alignment: 1xu1_T against 11xut_A
Query= 1xu1_T mol:protein length:42 Tumor necrosis factor receptor superfamily me
>1xu1_T mol:protein length:42 Tumor necrosis factor receptor superfamily
me
Length = 42
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/42 (100%), Positives = 42/42 (100%)
Query: 1 SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLR 42
SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLR
Sbjct: 1 SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLR 42