NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.

Query: 1z0k chain A

>pdb|2BME|A Related structures Chain A, High Resolution Structure Of Gnp-Bound Human Rab4a
Length=186

 Score =  335 bits (860),  Expect = 3e-93, Method: Composition-based stats.
 Identities = 169/171 (98%), Positives = 170/171 (99%), Gaps = 0/171 (0%)

Query  2    SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI  61
            SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI
Sbjct  4    SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI  63

Query  62   WDTAGLERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGN  121
            WDTAG ERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGN
Sbjct  64   WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGN  123

Query  122  KKDLDADREVTFLEASRFAQENELMFLETSALTGEDVEEAFVQCARKILNK  172
            KKDLDADREVTFLEASRFAQENELMFLETSALTGE+VEEAFVQCARKILNK
Sbjct  124  KKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK  174


Query: 1z0k chain B

>pdb|1YZM|A Related structures Chain A, Structure Of Rabenosyn (458-503), Rab4 Binding Domain
Length=51

 Score = 71.2 bits (173),  Expect = 7e-14, Method: Composition-based stats.
 Identities = 46/46 (100%), Positives = 46/46 (100%), Gaps = 0/46 (0%)

Query  24  PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQTEK  69
           PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQTEK
Sbjct  6   PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQTEK  51