NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY. 


Alignment: 2a5t_A against 1y20_A

Query= 2a5t_A mol:protein length:292  N-methyl-D-aspartate receptor NMDAR1-4a subun

>1y20_A mol:protein length:292  Glutamate [NMDA] receptor subunit zeta 1
          Length = 292

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 292/292 (100%), Positives = 292/292 (100%)
           
Query: 1   GMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVP 60
           GMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVP
Sbjct: 1   GMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVP 60 
           
Query: 61  QCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADM 120
           QCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADM
Sbjct: 61  QCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADM 120
           
Query: 121 IVAPLTINNERAQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSS 180
           IVAPLTINNERAQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSS
Sbjct: 121 IVAPLTINNERAQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSS 180
           
Query: 181 VDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVT 240
           VDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVT
Sbjct: 181 VDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVT 240
           
Query: 241 TGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 292
           TGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS
Sbjct: 241 TGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 292

Alignment: 2a5t_B against 2a5s_A

Query= 2a5t_B mol:protein length:284  N-methyl-D-aspartate receptor NMDAR2A subunit

>2a5s_A mol:protein length:284  N-methyl-D-aspartate receptor NMDAR2A
           subunit
          Length = 284

 Score =  592 bits (1526), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   GPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGF 60
           GPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGF
Sbjct: 1   GPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGF 60

Query: 61  CIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERS 120
           CIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERS
Sbjct: 61  CIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERS 120

Query: 121 EVVDFSVPFVETGISVMVSRGTQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNY 180
           EVVDFSVPFVETGISVMVSRGTQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNY
Sbjct: 121 EVVDFSVPFVETGISVMVSRGTQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNY 180

Query: 181 PYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFAT 240
           PYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFAT
Sbjct: 181 PYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFAT 240

Query: 241 TGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGICHN 284
           TGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGICHN
Sbjct: 241 TGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGICHN 284