NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 2g77_A against 1fkm_A
Query= 2g77_A mol:protein length:410 GTPase-activating protein GYP1
>1fkm_A mol:protein length:396 PROTEIN (GYP1P)
Length = 396
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/390 (99%), Positives = 390/390 (100%)
Query: 21 LNSIIQRISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGF 80
+NSIIQRISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGF
Sbjct: 1 MNSIIQRISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGF 60
Query: 81 LQRKRKEYRDSLKHTFSDQHSRDIPTWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLW 140
LQRKRKEYRDSLKHTFSDQHSRDIPTWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLW
Sbjct: 61 LQRKRKEYRDSLKHTFSDQHSRDIPTWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLW 120
Query: 141 AIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVKIKDPSTYMVDEQITDLEADTFW 200
AIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDV+IKDPSTYMVDEQITDLEADTFW
Sbjct: 121 AIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFW 180
Query: 201 CLTKLLEQITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCL 260
CLTKLLEQITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCL
Sbjct: 181 CLTKLLEQITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCL 240
Query: 261 LMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSP 320
LMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSP
Sbjct: 241 LMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSP 300
Query: 321 TTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPT 380
TTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPT
Sbjct: 301 TTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPT 360
Query: 381 KDWTETDIEMLLSEAFIWQSLYKDATSHWL 410
KDWTETDIEMLLSEAFIWQSLYKDATSHWL
Sbjct: 361 KDWTETDIEMLLSEAFIWQSLYKDATSHWL 390
Alignment: 2g77_B against 1z06_A
Query= 2g77_B mol:protein length:198 Ras-related protein Rab-33B
>1z06_A mol:protein length:189 Ras-related protein Rab-33B
Length = 189
Score = 366 bits (940), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/181 (97%), Positives = 177/181 (97%), Gaps = 2/181 (1%)
Query: 20 GCLPP--ARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER 77
G L P +RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER
Sbjct: 9 GSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER 68
Query: 78 IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDI 137
IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDI
Sbjct: 69 IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDI 128
Query: 138 PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKS 197
PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKS
Sbjct: 129 PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKS 188
Query: 198 H 198
H
Sbjct: 189 H 189