NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 2ido_A against 1j54_A
Query= 2ido_A mol:protein length:186 DNA polymerase III epsilon subunit
>1j54_A mol:protein length:186 DNA polymerase III, epsilon chain
Length = 186
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP 60
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP
Sbjct: 1 MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP 60
Query: 61 EAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPK 120
EAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPK
Sbjct: 61 EAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPK 120
Query: 121 TNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG 180
TNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG
Sbjct: 121 TNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG 180
Query: 181 GQTSMA 186
GQTSMA
Sbjct: 181 GQTSMA 186
Alignment: 2ido_B against 1se7_A
Query= 2ido_B mol:protein length:83 Hot protein
>1se7_A mol:protein length:83 HOMOLOGUE OF THE THETA SUBUNIT OF DNA
POLYMER
Length = 83
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 MYDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHY 60
MYDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHY
Sbjct: 1 MYDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHY 60
Query: 61 RQLSLQLPKGSDPAYQKDDAVKK 83
RQLSLQLPKGSDPAYQKDDAVKK
Sbjct: 61 RQLSLQLPKGSDPAYQKDDAVKK 83